BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005B12LP1|AL425340
(968 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1446 1849 0.0
>3x_Contig1446
Length = 10598
Score = 1849 bits (930), Expect = 0.0
Identities = 959/968 (99%), Gaps = 2/968 (0%)
Strand = Plus / Plus
Query: 1 agtggcttgaatttgaccatcacagatttggtgtacaggaggaattgaggttgcagtggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5137 agtggcttgaatttgaccatcacagatttggtgtacaggaggaattgaggttgcagtggt 5196
Query: 61 agcctgaatttgaccatcaccgatttgcgagacagcttgagccgttgtctttggagacgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5197 agcctgaatttgaccatcaccgatttgcgagacagcttgagccgttgtctttggagacgg 5256
Query: 121 ctttaaagtcttggtggtagcttgaatttgaccatcaccaatctgggagatagcagccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5257 ctttaaagtcttggtggtagcttgaatttgaccatcaccaatctgggagatagcagcaac 5316
Query: 181 gtctctcttggccttaggggtggaagtaaaggtggcagaggtggcagtagttgatgtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5317 gtctctcttggccttaggggtggaagtaaaggtggcagaggtggcagtagttgatgtctt 5376
Query: 241 ggtagatactgatgtggtgattggaataacggcaataccaaaggtggaagagtaatcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5377 ggtagatactgatgtggtgattggaataacggcaataccaaaggtggaagagtaatcagt 5436
Query: 301 caaaccaccttcgtaagtcgaatctggagtcaaagttgtccatggatcagatggaacgta 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5437 caaaccaccttcgtaagtagaatctggagtcaaagttgtccatggatcagatggaacgta 5496
Query: 361 ggcggcaaaggcacaagatgctagagaagcagcggtaaaagtctttctgaattgcattgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5497 ggcggcaaaggcacaagatgctagagaagcagcggtaaaagtctttctgaattgcattgt 5556
Query: 421 ttaaatgtattaagggcggttaggttggagtagtagttatccgtagtaaatgtaacagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5557 ttaaatgtattaagggcggttaggttggagtagtagttatccgtagtaaatgtaacagtg 5616
Query: 481 caagtmgttaatgcttgattggttgatgttctgatatccaaatgamattgagaatmagat 540
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 5617 caagtagttaatgcttgattggttgatgttctgatatccaaatgaaattgagaataagat 5676
Query: 541 atgaatagatggcggggacaatccagtttgataaccaggaggaccctttatatataaatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5677 atgaatagatggcggggacaatccagtttgataaccaggaggaccctttatatataaatc 5736
Query: 601 taaattctgggaatgttcaaacatcggatgggtatcgccacacccttcacctaaaatgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5737 taaattctgggaatgttcaaacatcggatgggtatcgccacacccttcacctaaaatgac 5796
Query: 661 aagatgatggaccctgtcatgatctaacaataacaaattcagtaaaaacaagcatgtgtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5797 aagatgatggaccctgtcatgatctaacaataacaaattcagtaaaaacaagcatgtgtc 5856
Query: 721 atgcaggttcaactacaggaaggtacctagcaggaactgggaaaaagcataccggacaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5857 atgcaggttcaactacaggaaggtacctagcaggaactgggaaaaagcataccggacaca 5916
Query: 781 tttccacttgcccttacagcagttacagttactattttgacgggtaatgctggtttttgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5917 tttccacttgcccttacagcagttacagttactattttgacgggtaatgctggtttttgg 5976
Query: 841 agccttcatgtcgaggttccccagaattataggaataagaattcacaagagcggaaaata 900
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5977 agccttcatgtcga-gttccccagagttataggaataagaattcacaagagcggaaaata 6035
Query: 901 agagaaatagacgcatagctgttcagccactcgagttacytgaaatatgatctgatctga 960
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 6036 agagaaatagacgcatagctgttcagccactcgagtaac-tgaaatatgatctgatctga 6094
Query: 961 ttatctgt 968
||||||||
Sbjct: 6095 ttatctgt 6102
Score = 133 bits (67), Expect = 6e-31
Identities = 98/107 (91%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 257 gtgattggaataacggcaataccaaaggtggaagagtaatcagtcaaaccaccttcgtaa 316
|||||||||||||| |||||||| ||| | |||| |||||||||||||||||||| ||||
Sbjct: 8161 gtgattggaataacagcaataccgaag-tagaagcgtaatcagtcaaaccacctttgtaa 8103
Query: 317 gtcgaatctggagtcaaagttgtccatggatcagatggaacgtaggc 363
|| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 8102 gtagaatctggggtcaaagtggtccatggatcagatggaacgtaggc 8056
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5838
Number of Sequences: 1807
Number of extensions: 5838
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 968
length of database: 10,358,551
effective HSP length: 16
effective length of query: 952
effective length of database: 10,329,639
effective search space: 9833816328
effective search space used: 9833816328
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)